- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : clade E phosphatase
Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU6Hr1G043680.5 | |
| Cluster | HCAA Clusters: Cluster_131 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi4g44750 | No alias | Protein phosphatase 2C family protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G159200.1 | No alias | clade E phosphatase | 0.06 | Orthogroups_2024-Update | |
| Seita.7G329500.1 | No alias | clade E phosphatase | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G216600.1 | No alias | clade E phosphatase | 0.03 | Orthogroups_2024-Update | |
| Sopen10g001610 | No alias | Protein phosphatase 2C | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predicted GO |
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Predicted GO |
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Predicted GO |
| MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
| CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Predicted GO |
| CC | GO:0005730 | nucleolus | IEP | Predicted GO |
| CC | GO:0005787 | signal peptidase complex | IEP | Predicted GO |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Predicted GO |
| BP | GO:0006465 | signal peptide processing | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Predicted GO |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044422 | organelle part | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predicted GO |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
| CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001932 | PPM-type_phosphatase_dom | 230 | 413 |
| No external refs found! |