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  5. At3g20440

At3g20440


Description : 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:D2WL32]


Gene families : OG_42_0001294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g20440
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
A4A49_31037 No alias 1,4-alpha-glucan-branching enzyme 0.02 Orthogroups_2024-Update
Brara.E00842.1 No alias EC_2.4 glycosyltransferase & starch branching enzyme 0.03 Orthogroups_2024-Update
Brara.E02162.1 No alias starch branching enzyme & EC_2.4 glycosyltransferase 0.05 Orthogroups_2024-Update
HORVU2Hr1G072500.34 No alias EC_2.4 glycosyltransferase & starch branching enzyme 0.03 Orthogroups_2024-Update
Kfl00167_0090 kfl00167_0090_v1.1 (at5g03650 : 1167.0) Encodes starch branching enzyme... 0.02 Orthogroups_2024-Update
evm.model.tig00000981.14 No alias (at2g36390 : 474.0) Encodes a starch branching enzyme... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0043169 cation binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 424 468
IPR006048 A-amylase/branching_C 771 863
No external refs found!