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  5. HORVU6Hr1G047870.6

HORVU6Hr1G047870.6


Description : large subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG_42_0000977 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G047870.6
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Bradi2g20990 No alias ribulose-bisphosphate carboxylases 0.07 Orthogroups_2024-Update
HORVU0Hr1G024560.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G084630.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00008423-RA No alias (q70xz5|rbl_ambtc : 335.0) Ribulose bisphosphate... 0.03 Orthogroups_2024-Update
PSME_00014645-RA No alias (p41621|rbl_pinth : 216.0) Ribulose bisphosphate... 0.03 Orthogroups_2024-Update
PSME_00018769-RA No alias (p56648|rbl_vitvi : 182.0) Ribulose bisphosphate... 0.03 Orthogroups_2024-Update
Sobic.005G194400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA 16Dec
BP GO:0015977 carbon fixation IEA 16Dec
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0031647 regulation of protein stability IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0042301 phosphate ion binding IEP Predicted GO
BP GO:0050821 protein stabilization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR017443 RuBisCO_lsu_fd_N 31 151
IPR000685 RuBisCO_lsu_C 161 469
No external refs found!