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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU6Hr1G050490.1 | |
| Cluster | HCAA Clusters: Cluster_277 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_29196 | No alias | ring-h2 finger protein atl72 | 0.02 | Orthogroups_2024-Update | |
| A4A49_36505 | No alias | e3 ubiquitin-protein ligase atl6 | 0.03 | Orthogroups_2024-Update | |
| A4A49_36944 | No alias | ring-h2 finger protein atl52 | 0.04 | Orthogroups_2024-Update | |
| At3g05200 | No alias | E3 ubiquitin-protein ligase ATL6... | 0.03 | Orthogroups_2024-Update | |
| At5g06490 | No alias | Putative RING-H2 finger protein ATL71... | 0.05 | Orthogroups_2024-Update | |
| At5g07040 | No alias | Putative RING-H2 finger protein ATL69... | 0.03 | Orthogroups_2024-Update | |
| Bradi2g22650 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.B02021.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.E02489.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.F02863.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.K00292.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G004519 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.06G015200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G214600 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.15G079900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G028400 | No alias | TOXICOS EN LEVADURA 2 | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G239400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os12g24490 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.008G054200 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.010G243500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G203900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.5G023000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G283400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G152100.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Solyc01g109200 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061DYT2_THECC) | 0.04 | Orthogroups_2024-Update | |
| Solyc08g076830 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.04 | Orthogroups_2024-Update | |
| Sopen06g017190 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000814 | ESCRT II complex | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| BP | GO:0009056 | catabolic process | IEP | Predicted GO |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predicted GO |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Predicted GO |
| CC | GO:0036452 | ESCRT complex | IEP | Predicted GO |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
| CC | GO:0044440 | endosomal part | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Predicted GO |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 98 | 141 |
| No external refs found! |