HORVU6Hr1G052870.1

Description : Unknown function

Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G052870.1
Cluster	HCAA Clusters: Cluster_235

Target	Alias	Description	ECC score	Gene Family Method
At1g42190	No alias	GAG/POL/ENV polyprotein [Source:UniProtKB/TrEMBL;Acc:Q9C763]	0.03	Orthogroups_2024-Update
LOC_Os10g22160	No alias	retrotransposon, putative, centromere-specific, expressed	0.02	Orthogroups_2024-Update
Solyc10g047790	No alias	No description available	0.02	Orthogroups_2024-Update
Sopen04g010080	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen08g012730	No alias	Retroviral aspartyl protease	0.02	Orthogroups_2024-Update
Sopen11g025280	No alias	Integrase core domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!