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  5. At3g20700

At3g20700


Description : F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:Q9LHQ2]


Gene families : OG_42_0000379 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g20700
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
At1g67450 No alias Putative F-box protein At1g67450... 0.04 Orthogroups_2024-Update
At2g18780 No alias F-box protein At2g18780 [Source:UniProtKB/Swiss-Prot;Acc:Q84V15] 0.03 Orthogroups_2024-Update
At3g13680 No alias F-box/kelch-repeat protein At3g13680... 0.04 Orthogroups_2024-Update
At3g22700 No alias F-box protein At3g22700 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUJ1] 0.05 Orthogroups_2024-Update
At4g17200 No alias Putative F-box protein At4g17200... 0.04 Orthogroups_2024-Update
Brara.C03996.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K00571.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 164 321
No external refs found!