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  5. HORVU6Hr1G055260.4

HORVU6Hr1G055260.4


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G055260.4
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
180454 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
A4A49_14246 No alias putative e3 ubiquitin-protein ligase ari8 0.05 Orthogroups_2024-Update
Bradi1g69300 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g41760 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Bradi3g48130 No alias IBR domain-containing protein 0.05 Orthogroups_2024-Update
Brara.A00383.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.H02982.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J00407.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G100913 No alias IBR domain-containing protein 0.04 Orthogroups_2024-Update
GRMZM2G136293 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G129000 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.12G053500 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Kfl00084_0120 kfl00084_0120_v1.1 (at2g16090 : 575.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.02 Orthogroups_2024-Update
LOC_Os04g41470 No alias expressed protein 0.04 Orthogroups_2024-Update
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Potri.008G077100 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Seita.6G230200.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Seita.7G148700.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.006G131000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.007G185900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.07 Orthogroups_2024-Update
Solyc01g109280 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.4) 0.02 Orthogroups_2024-Update
Sopen11g004370 No alias IBR domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 201 262
IPR002867 IBR_dom 279 327
No external refs found!