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  5. HORVU6Hr1G055740.1

HORVU6Hr1G055740.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G055740.1
Cluster HCAA Clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
At3g22170 No alias FHY3 [Source:UniProtKB/TrEMBL;Acc:A0A178VJL5] 0.03 Orthogroups_2024-Update
GRMZM2G034868 No alias FRS (FAR1 Related Sequences) transcription factor family 0.03 Orthogroups_2024-Update
GRMZM2G155980 No alias FAR1-related sequence 6 0.02 Orthogroups_2024-Update
LOC_Os07g18840 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g42400 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.004G209100 No alias FAR1-related sequence 9 0.03 Orthogroups_2024-Update
Seita.7G295500.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G173300.1 No alias FRS/FRF-type transcription factor 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 53 136
IPR007527 Znf_SWIM 547 575
IPR018289 MULE_transposase_dom 257 350
No external refs found!