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  5. HORVU6Hr1G055990.3

HORVU6Hr1G055990.3


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G055990.3
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_19470 No alias protein far-red impaired response 1 0.05 Orthogroups_2024-Update
At1g52520 No alias Protein FAR1-RELATED SEQUENCE 6... 0.03 Orthogroups_2024-Update
At4g19990 No alias FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19] 0.05 Orthogroups_2024-Update
Brara.E02013.1 No alias transcriptional regulator of red/far-red light... 0.04 Orthogroups_2024-Update
GRMZM2G155980 No alias FAR1-related sequence 6 0.02 Orthogroups_2024-Update
Glyma.03G136800 No alias FAR1-related sequence 6 0.04 Orthogroups_2024-Update
Glyma.09G001300 No alias FRS (FAR1 Related Sequences) transcription factor family 0.02 Orthogroups_2024-Update
Glyma.20G024700 No alias FAR1-related sequence 6 0.02 Orthogroups_2024-Update
LOC_Os02g34590 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.016G007300 No alias FAR1-related sequence 10 0.03 Orthogroups_2024-Update
Seita.1G186800.1 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g096850 No alias Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A0B2S126_GLYSO) 0.03 Orthogroups_2024-Update
Sopen07g022850 No alias FAR1 DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 55 138
IPR007527 Znf_SWIM 375 399
No external refs found!