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  5. HORVU6Hr1G060440.5

HORVU6Hr1G060440.5


Description : E3 ubiquitin ligase *(RMA/MUSE)


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G060440.5
Cluster HCAA Clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
A4A49_02918 No alias e3 ubiquitin-protein ligase rma1h1 0.04 Orthogroups_2024-Update
GRMZM2G078526 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
GRMZM2G149028 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G169994 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Glyma.12G112000 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G091220.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Potri.004G042700 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Sobic.006G157500.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 31 75
No external refs found!