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  5. HORVU6Hr1G061730.1

HORVU6Hr1G061730.1


Description : regulatory protein *(CLSY3/4) of transacting siRNA pathway


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G061730.1
Cluster HCAA Clusters: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G201800 No alias SNF2 domain-containing protein / helicase... 0.03 Orthogroups_2024-Update
HORVU4Hr1G074230.18 No alias component *(DRD1) of DNA methylation accessory complex 0.03 Orthogroups_2024-Update
Seita.1G254800.1 No alias regulatory protein *(CLSY3/4) of transacting siRNA pathway 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 200 306
IPR000330 SNF2_N 11 131
No external refs found!