HORVU6Hr1G062040.3

Description : component *(bL19c) of large plastid ribosomal-subunit proteome

Gene families : OG_42_0002220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002220_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G062040.3
Cluster	HCAA Clusters: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g50390	No alias	Ribosomal protein L19 family protein	0.23	Orthogroups_2024-Update
Brara.F03563.1	No alias	component *(bL19c) of large plastid ribosomal-subunit proteome	0.05	Orthogroups_2024-Update
Brara.H00935.1	No alias	component *(bL19c) of large plastid ribosomal-subunit proteome	0.13	Orthogroups_2024-Update
Brara.I01980.1	No alias	component *(bL19c) of large plastid ribosomal-subunit proteome	0.15	Orthogroups_2024-Update
Cre07.g322500	No alias	Ribosomal protein L19 family protein	0.02	Orthogroups_2024-Update
Cre17.g734450	No alias	Ribosomal protein L19 family protein	0.2	Orthogroups_2024-Update
Glyma.01G205400	No alias	Ribosomal protein L19 family protein	0.11	Orthogroups_2024-Update
Glyma.11G037500	No alias	Ribosomal protein L19 family protein	0.08	Orthogroups_2024-Update
MA_947876g0010	No alias	(at4g17560 : 107.0) Ribosomal protein L19 family...	0.07	Orthogroups_2024-Update
Mp3g02740.1	No alias	component mtRPL19 of large ribosomal subunit proteome....	0.05	Orthogroups_2024-Update
Potri.001G152200	No alias	Ribosomal protein L19 family protein	0.09	Orthogroups_2024-Update
Pp1s44_176V6	No alias	50s ribosomal protein	0.04	Orthogroups_2024-Update
Seita.1G256000.1	No alias	component *(bL19c) of large plastid ribosomal-subunit proteome	0.08	Orthogroups_2024-Update
Sobic.004G298100.1	No alias	component *(bL19c) of large plastid ribosomal-subunit proteome	0.16	Orthogroups_2024-Update
Solyc08g078010	No alias	Ribosomal protein L19 family protein (AHRD V3.3 *** AT4G17560.1)	0.12	Orthogroups_2024-Update
Sopen08g026520	No alias	Ribosomal protein L19	0.15	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Predicted GO
MF	GO:0004784	superoxide dismutase activity	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001857	Ribosomal_L19	121	214

External Links

No external refs found!

HORVU6Hr1G062040.3

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation