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Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU6Hr1G065970.1 | |
| Cluster | HCAA Clusters: Cluster_274 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 415185 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| 78092 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 97289 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
| Bradi1g12697 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g36010 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g47160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g40131 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Brara.E03135.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G030148 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G163359 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G228000 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G183600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.16G035600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G141800 | No alias | mitochondrial RNAediting factor 1 | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G009930.2 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| HORVU3Hr1G052470.6 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g62910 | No alias | CRR2, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g74600 | No alias | vegetative storage protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g11700 | No alias | pentatricopeptide repeat domain containing protein,... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005244-RA | No alias | (at3g46790 : 286.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
| PSME_00006159-RA | No alias | (at3g46790 : 260.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
| PSME_00021863-RA | No alias | (at2g22070 : 612.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.012G108000 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.013G152000 | No alias | mitochondrial editing factor 22 | 0.02 | Orthogroups_2024-Update | |
| Seita.3G224300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.007G201400.1 | No alias | RNA editing factor *(DOT4) | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G197400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.02 | Orthogroups_2024-Update | |
| Solyc02g069500 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen05g018650 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
| Sopen07g026910 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 194 | 241 |
| IPR002885 | Pentatricopeptide_repeat | 445 | 470 |
| IPR002885 | Pentatricopeptide_repeat | 91 | 116 |
| IPR002885 | Pentatricopeptide_repeat | 269 | 291 |
| IPR002885 | Pentatricopeptide_repeat | 473 | 499 |
| IPR002885 | Pentatricopeptide_repeat | 62 | 83 |
| IPR002885 | Pentatricopeptide_repeat | 370 | 395 |
| IPR002885 | Pentatricopeptide_repeat | 509 | 537 |
| IPR002885 | Pentatricopeptide_repeat | 547 | 570 |
| IPR002885 | Pentatricopeptide_repeat | 342 | 367 |
| No external refs found! |