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  5. HORVU6Hr1G067170.3

HORVU6Hr1G067170.3


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G067170.3
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Bradi2g47330 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
GRMZM5G833207 No alias ATP binding cassette subfamily B4 0.02 Orthogroups_2024-Update
Glyma.17G041200 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
HORVU2Hr1G001450.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
LOC_Os02g46680 No alias multidrug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.1G055500.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Seita.1G191000.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 88 236
IPR003439 ABC_transporter-like 726 874
IPR011527 ABC1_TM_dom 390 660
No external refs found!