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  5. HORVU6Hr1G068970.3

HORVU6Hr1G068970.3


Description : TUB-type transcription factor


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G068970.3
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
At1g53320 No alias Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9] 0.02 Orthogroups_2024-Update
Bradi4g41820 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
Bradi5g27110 No alias tubby like protein 1 0.04 Orthogroups_2024-Update
Brara.H00415.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J01702.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G435445 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Glyma.17G022700 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Mp3g02190.1 No alias transcription factor (TUB) 0.03 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Seita.2G422900.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G372000.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G195900.1 No alias TUB-type transcription factor 0.04 Orthogroups_2024-Update
Solyc04g071750 No alias Tubby-like F-box protein (AHRD V3.3 *** K4BTG5_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 66 112
IPR000007 Tubby_C 127 422
No external refs found!