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  5. HORVU6Hr1G069560.1

HORVU6Hr1G069560.1


Description : nuclear lamina lamin-like protein *(CRWN)


Gene families : OG_42_0001967 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G069560.1
Cluster HCAA Clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
At1g13220 No alias nuclear matrix constituent protein-related... 0.05 Orthogroups_2024-Update
At1g67230 No alias Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5] 0.04 Orthogroups_2024-Update
At1g68790 No alias Protein CROWDED NUCLEI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA42] 0.02 Orthogroups_2024-Update
At5g65770 No alias little nuclei4 [Source:TAIR;Acc:AT5G65770] 0.03 Orthogroups_2024-Update
Bradi3g53047 No alias little nuclei1 0.04 Orthogroups_2024-Update
Glyma.18G280500 No alias little nuclei1 0.02 Orthogroups_2024-Update
Kfl00193_0080 kfl00193_0080_v1.1 (at1g67230 : 101.0) Encodes a nuclear coiled-coil... 0.03 Orthogroups_2024-Update
Solyc03g045050 No alias Nuclear matrix constituent-like protein 1 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!