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Description : Pentatricopeptide repeat-containing protein At3g21470 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVF9]
Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Arabidopsis release: At3g21470 | |
| Cluster | HCCA clusters: Cluster_95 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0007275 | multicellular organism development | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009555 | pollen development | IEP | Predicted GO |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Predicted GO |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Predicted GO |
| MF | GO:0016151 | nickel cation binding | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0017069 | snRNA binding | IEP | Predicted GO |
| MF | GO:0017070 | U6 snRNA binding | IEP | Predicted GO |
| BP | GO:0019627 | urea metabolic process | IEP | Predicted GO |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0030623 | U5 snRNA binding | IEP | Predicted GO |
| BP | GO:0032501 | multicellular organismal process | IEP | Predicted GO |
| BP | GO:0032502 | developmental process | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0043419 | urea catabolic process | IEP | Predicted GO |
| BP | GO:0043605 | cellular amide catabolic process | IEP | Predicted GO |
| BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| BP | GO:0048229 | gametophyte development | IEP | Predicted GO |
| BP | GO:0048856 | anatomical structure development | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 85 | 112 |
| IPR002885 | Pentatricopeptide_repeat | 179 | 206 |
| IPR002885 | Pentatricopeptide_repeat | 313 | 335 |
| IPR002885 | Pentatricopeptide_repeat | 145 | 170 |
| IPR002885 | Pentatricopeptide_repeat | 114 | 138 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 233 |
| IPR002885 | Pentatricopeptide_repeat | 238 | 285 |
| IPR002885 | Pentatricopeptide_repeat | 339 | 386 |
| IPR002885 | Pentatricopeptide_repeat | 405 | 436 |
| No external refs found! |