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  5. HORVU6Hr1G070790.6

HORVU6Hr1G070790.6


Description : EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase


Gene families : OG_42_0001645 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001645_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G070790.6
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Seita.2G371500.1 No alias EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase 0.05 Orthogroups_2024-Update
Solyc05g005800 No alias Threonyl-tRNA synthetase (AHRD V3.3 *** AT5G26830.1) 0.02 Orthogroups_2024-Update
Sopen05g001810 No alias tRNA synthetase class II core domain (G, H, P, S and T) 0.04 Orthogroups_2024-Update
evm.model.tig00000169.10 No alias (at2g04842 : 755.0) Encodes a dual localized... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA 16Dec
MF GO:0004812 aminoacyl-tRNA ligase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006418 tRNA aminoacylation for protein translation IEA 16Dec
BP GO:0043039 tRNA aminoacylation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004154 Anticodon-bd 586 674
IPR002314 aa-tRNA-synt_IIb 365 574
IPR012947 tRNA_SAD 210 262
No external refs found!