1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU6Hr1G072110.1

HORVU6Hr1G072110.1


Description : transcription factor *(LEC) involved in seed maturation & component *(NF-YB) of NF-Y transcription factor complex


Gene families : OG_42_0000232 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000232_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G072110.1
Cluster HCAA Clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
At2g13570 No alias Uncharacterized protein At2g13570 (Fragment)... 0.03 Orthogroups_2024-Update
HORVU7Hr1G119940.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update
LOC_Os02g49410 No alias histone-like transcription factor and archaeal histone,... 0.02 Orthogroups_2024-Update
Pp1s83_179V6 No alias ccaat-binding transcription factor subunit 0.01 Orthogroups_2024-Update
Seita.1G302900.1 No alias component *(NF-YB) of NF-Y transcription factor complex 0.04 Orthogroups_2024-Update
Sopen04g023610 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 36 99
No external refs found!