1. Home
  2. Species
  3. Hordeum vulgare
  4. Sequence
  5. HORVU6Hr1G077570.1

HORVU6Hr1G077570.1


Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G077570.1
Cluster HCAA Clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_14853 No alias coronatine-insensitive protein 1 0.03 Orthogroups_2024-Update
At3g26810 No alias AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7] 0.02 Orthogroups_2024-Update
Bradi1g67160 No alias RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.D02421.1 No alias component *(COI) of jasmonic acid receptor complex 0.02 Orthogroups_2024-Update
GRMZM2G151536 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G065300 No alias auxin signaling F-box 3 0.04 Orthogroups_2024-Update
Glyma.02G152800 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G093500 No alias auxin F-box protein 5 0.02 Orthogroups_2024-Update
PSME_00024313-RA No alias (at5g49980 : 738.0) auxin F-box protein 5 (AFB5);... 0.03 Orthogroups_2024-Update
Potri.004G033900 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s140_66V6 No alias coronitine insensitive 1 0.02 Orthogroups_2024-Update
Solyc09g074520 No alias Transport inhibitor response 1 (AHRD V3.3 *** C7E4R3_TOBAC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!