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  5. HORVU6Hr1G078290.1

HORVU6Hr1G078290.1


Description : component *(uL29c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0005394 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005394_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G078290.1
Cluster HCAA Clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Bradi3g58780 No alias Ribosomal L29 family protein 0.09 Orthogroups_2024-Update
Brara.B03943.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Brara.F02392.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Glyma.05G178000 No alias Ribosomal L29 family protein 0.04 Orthogroups_2024-Update
Kfl00134_0120 kfl00134_0120_v1.1 (q9swi6|rk29_maize : 81.6) 50S ribosomal protein L29,... 0.03 Orthogroups_2024-Update
MA_10431457g0010 No alias (at5g65220 : 152.0) Ribosomal L29 family protein ;... 0.06 Orthogroups_2024-Update
Potri.007G093700 No alias Ribosomal L29 family protein 0.09 Orthogroups_2024-Update
Pp1s224_36V6 No alias 50s ribosomal protein chloroplast 0.08 Orthogroups_2024-Update
Pp1s89_23V6 No alias 50s ribosomal protein l29 0.12 Orthogroups_2024-Update
Seita.1G324700.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.12 Orthogroups_2024-Update
Sobic.004G231800.1 No alias component *(uL29c) of large plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Solyc03g097950 No alias 50S ribosomal protein L29 (AHRD V3.3 *** F4YFA4_CAMSI) 0.1 Orthogroups_2024-Update
Solyc06g072470 No alias zinc finger (C2H2 type) family protein (AHRD V3.3 --*... 0.07 Orthogroups_2024-Update
Sopen03g028660 No alias Ribosomal L29 protein 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 71 126
No external refs found!