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  5. HORVU6Hr1G079040.7

HORVU6Hr1G079040.7


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G079040.7
Cluster HCAA Clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Potri.012G002200 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
Seita.7G259800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 184 512
No external refs found!