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  5. HORVU6Hr1G079410.4

HORVU6Hr1G079410.4


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G079410.4
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At1g34650 No alias Homeobox-leucine zipper protein HDG10... 0.03 Orthogroups_2024-Update
At4g21750 No alias ATML1 [Source:UniProtKB/TrEMBL;Acc:A0A178UZ61] 0.02 Orthogroups_2024-Update
Bradi3g51540 No alias homeodomain GLABROUS 1 0.03 Orthogroups_2024-Update
Bradi5g18717 No alias homeodomain GLABROUS 1 0.05 Orthogroups_2024-Update
Brara.F01260.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03589.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J00761.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.09G143700 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Glyma.13G288800 No alias homeodomain GLABROUS 2 0.02 Orthogroups_2024-Update
Glyma.15G016500 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.02 Orthogroups_2024-Update
HORVU0Hr1G013510.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G095210.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G077690.2 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G073450.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
MA_122121g0010 No alias (at4g00730 : 551.0) Encodes a homeodomain protein of the... 0.03 Orthogroups_2024-Update
Potri.002G230200 No alias homeodomain GLABROUS 2 0.02 Orthogroups_2024-Update
Pp1s173_90V6 No alias No description available 0.01 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Solyc03g120620 No alias Homeobox leucine zipper protein (AHRD V3.3 *** G7IUR3_MEDTR) 0.02 Orthogroups_2024-Update
Solyc08g062520 No alias No description available 0.02 Orthogroups_2024-Update
Sopen03g005620 No alias START domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 17 72
IPR002913 START_lipid-bd_dom 210 434
No external refs found!