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  5. HORVU6Hr1G083110.1

HORVU6Hr1G083110.1


Description : histone *(H2B)


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G083110.1
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Bradi1g66380 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G342515 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G078480.6 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
HORVU3Hr1G013680.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
LOC_Os01g05900 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.02 Orthogroups_2024-Update
MA_10435143g0020 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 33 147
No external refs found!