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  5. HORVU6Hr1G083570.16

HORVU6Hr1G083570.16


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G083570.16
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_17163 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
A4A49_28967 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
At1g42540 No alias Glutamate receptor 3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E7] 0.02 Orthogroups_2024-Update
At2g17260 No alias glutamate receptor 2 [Source:TAIR;Acc:AT2G17260] 0.03 Orthogroups_2024-Update
At2g32390 No alias Glutamate receptor 3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW97] 0.03 Orthogroups_2024-Update
Bradi4g30850 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Brara.D01493.1 No alias ligand-gated cation channel *(GLR) 0.06 Orthogroups_2024-Update
Brara.F03008.1 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
GRMZM2G139933 No alias glutamate receptor 2.7 0.04 Orthogroups_2024-Update
Glyma.13G093332 No alias glutamate receptor 2.5 0.03 Orthogroups_2024-Update
Glyma.13G233300 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Glyma.13G272400 No alias glutamate receptor 2.8 0.04 Orthogroups_2024-Update
HORVU6Hr1G083680.2 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
HORVU7Hr1G031680.2 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
MA_10140272g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00001098-RA No alias (at2g29120 : 637.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00005234-RA No alias (at1g05200 : 189.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00007782-RA No alias (at2g17260 : 247.0) Encodes a glutamate receptor.... 0.03 Orthogroups_2024-Update
PSME_00018332-RA No alias (at1g05200 : 548.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00032127-RA No alias (at4g35290 : 436.0) Encodes a putative glutamate... 0.02 Orthogroups_2024-Update
PSME_00033212-RA No alias (at1g42540 : 242.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00037073-RA No alias (at2g17260 : 246.0) Encodes a glutamate receptor.... 0.02 Orthogroups_2024-Update
Potri.001G375200 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Potri.004G052600 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Potri.006G268200 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
Potri.014G028500 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Seita.1G346100.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Seita.4G260500.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Sobic.002G208700.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.002G209100.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Solyc06g063210 No alias glutamate receptor-like 2.5 0.03 Orthogroups_2024-Update
evm.model.contig_448.19 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 831 863
IPR001828 ANF_lig-bd_rcpt 73 429
IPR001638 Solute-binding_3/MltF_N 509 830
No external refs found!