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  5. At3g22170

At3g22170


Description : FHY3 [Source:UniProtKB/TrEMBL;Acc:A0A178VJL5]


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g22170
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Bradi1g01990 No alias FAR1-related sequence 6 0.02 Orthogroups_2024-Update
Bradi1g29147 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Bradi4g41960 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Glyma.09G039300 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
HORVU2Hr1G040290.3 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G098600.4 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G010730.2 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G055740.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g39790 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g42400 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Sobic.002G316600.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007093 mitotic cell cycle checkpoint IEP Predicted GO
BP GO:0007094 mitotic spindle assembly checkpoint IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
BP GO:0010948 negative regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0031577 spindle checkpoint IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predicted GO
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predicted GO
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051784 negative regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0051985 negative regulation of chromosome segregation IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071173 spindle assembly checkpoint IEP Predicted GO
BP GO:0071174 mitotic spindle checkpoint IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
BP GO:1905819 negative regulation of chromosome separation IEP Predicted GO
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:2001251 negative regulation of chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 84 186
IPR018289 MULE_transposase_dom 284 376
No external refs found!