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  5. HORVU6Hr1G085370.2

HORVU6Hr1G085370.2


Description : aminoacyl-tRNA binding factor *(eEF1A))


Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU6Hr1G085370.2
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
169717 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
MA_9512579g0020 No alias (p25698|ef1a_soybn : 118.0) Elongation factor 1-alpha... 0.03 Orthogroups_2024-Update
PSME_00025384-RA No alias (p34823|ef1a2_dauca : 351.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update
Pp1s59_163V6 No alias elongation factor 1- 0.02 Orthogroups_2024-Update
evm.model.tig00021352.60 No alias (q03033|ef1a_wheat : 155.0) Elongation factor 1-alpha... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
IPR004161 EFTu-like_2 248 313
IPR000795 TF_GTP-bd_dom 7 222
No external refs found!