HORVU6Hr1G089560.1

Description : E3 ubiquitin ligase

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU6Hr1G089560.1
Cluster	HCAA Clusters: Cluster_259

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10671	No alias	u-box domain-containing protein 27	0.05	Orthogroups_2024-Update
A4A49_33780	No alias	e3 ubiquitin-protein ligase pub23	0.03	Orthogroups_2024-Update
Bradi3g45200	No alias	plant U-box 23	0.02	Orthogroups_2024-Update
Bradi3g45380	No alias	plant U-box 25	0.02	Orthogroups_2024-Update
Bradi5g09720	No alias	plant U-box 22	0.07	Orthogroups_2024-Update
GRMZM2G055052	No alias	CYS, MET, PRO, and GLY protein 1	0.03	Orthogroups_2024-Update
GRMZM5G855994	No alias	ARM repeat superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G189000	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
HORVU2Hr1G076470.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Kfl00376_0010	kfl00376_0010_v1....	(at2g28830 : 87.8) PLANT U-BOX 12 (PUB12); FUNCTIONS IN:...	0.02	Orthogroups_2024-Update
LOC_Os04g58920	No alias	U-box domain-containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g30330	No alias	U-box domain containing protein, putative, expressed	0.04	Orthogroups_2024-Update
MA_684442g0010	No alias	(at3g52450 : 140.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
PSME_00043035-RA	No alias	(at3g52450 : 95.9) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00048709-RA	No alias	(at2g35930 : 183.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
PSME_00054803-RA	No alias	(at3g52450 : 283.0) Encodes a cytoplasmically localized...	0.04	Orthogroups_2024-Update
PSME_00056652-RA	No alias	(at2g35930 : 195.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
PSME_00056761-RA	No alias	(at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS...	0.02	Orthogroups_2024-Update
Potri.002G070500	No alias	plant U-box 29	0.02	Orthogroups_2024-Update
Potri.006G202600	No alias	plant U-box 22	0.02	Orthogroups_2024-Update
Potri.006G202700	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
Pp1s109_251V6	No alias	u-box domain-containing protein	0.03	Orthogroups_2024-Update
Pp1s198_49V6	No alias	F14J22.1; U-box domain-containing protein [Arabidopsis thaliana]	0.03	Orthogroups_2024-Update
Pp1s67_203V6	No alias	MLD14.11; U-box domain-containing protein [Arabidopsis thaliana]	0.03	Orthogroups_2024-Update
Seita.4G109000.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Seita.7G104100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G169200.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Sobic.004G169900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	16Dec
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
MF	GO:0008146	sulfotransferase activity	IEP	Predicted GO
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Predicted GO
MF	GO:0019899	enzyme binding	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	39	109

External Links

No external refs found!

HORVU6Hr1G089560.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation