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At3g22800


Description : Leucine-rich repeat extensin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUI1]


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g22800
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
A4A49_26804 No alias pollen-specific leucine-rich repeat extensin-like protein 1 0.02 Orthogroups_2024-Update
A4A49_27226 No alias leucine-rich repeat extensin-like protein 4 0.03 Orthogroups_2024-Update
At1g12040 No alias Leucine-rich repeat extensin-like protein 1... 0.03 Orthogroups_2024-Update
At3g19020 No alias Pollen-specific leucine-rich repeat extensin-like... 0.06 Orthogroups_2024-Update
At3g24480 No alias Leucine-rich repeat extensin-like protein 4... 0.04 Orthogroups_2024-Update
At4g29240 No alias Extensin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M0F7] 0.04 Orthogroups_2024-Update
Bradi2g05080 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Brara.C03718.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Glyma.05G225300 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Glyma.12G116200 No alias Leucine-rich repeat (LRR) family protein 0.02 Orthogroups_2024-Update
Pp1s35_242V6 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g050470 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 268 321
IPR013210 LRR_N_plant-typ 56 89
No external refs found!