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At3g23020


Description : Pentatricopeptide repeat-containing protein At3g23020 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS88]


Gene families : OG_42_0002876 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002876_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g23020
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
77736 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_32927 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
PSME_00014001-RA No alias (at3g23020 : 705.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Solyc09g083110 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 597 656
IPR002885 Pentatricopeptide_repeat 505 551
IPR002885 Pentatricopeptide_repeat 681 724
IPR002885 Pentatricopeptide_repeat 186 233
IPR002885 Pentatricopeptide_repeat 754 793
IPR002885 Pentatricopeptide_repeat 298 340
IPR002885 Pentatricopeptide_repeat 365 412
No external refs found!