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  5. HORVU7Hr1G012820.2

HORVU7Hr1G012820.2


Description : histone *(H3)


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G012820.2
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
438193 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
A4A49_56508 No alias histone h3.2 0.02 Orthogroups_2024-Update
A4A49_57080 No alias histone h3.2 0.02 Orthogroups_2024-Update
A4A49_61103 No alias histone h3.2 0.03 Orthogroups_2024-Update
At1g09200 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.03 Orthogroups_2024-Update
At5g10400 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.03 Orthogroups_2024-Update
Bradi1g49990 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g49997 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g27720 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g07840 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Brara.B00354.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Brara.B00387.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Brara.B03430.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.C00416.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.D00649.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.H02834.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.04 Orthogroups_2024-Update
Brara.J02314.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g267950 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g505500 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G078314 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G130079 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G171387 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G179005 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G418258 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G227400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G130900 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G055200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G173100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G342000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G222200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G266200 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G074340.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Kfl00417_0090 kfl00417_0090_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update
MA_24261g0010 No alias (at5g10980 : 255.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
MA_350032g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
MA_475294g0010 No alias (at5g65360 : 226.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_561217g0010 No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_74555g0010 No alias (at5g65360 : 127.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Mp3g09090.1 No alias histone (H3) 0.04 Orthogroups_2024-Update
Mp7g10730.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
PSME_00017144-RA No alias (at5g10980 : 144.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.001G016700 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G028800 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Potri.T159501 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Pp1s12_93V6 No alias histone h3 0.02 Orthogroups_2024-Update
Seita.3G227400.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Seita.4G066000.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Sobic.006G076400.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.05 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.04 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.05 Orthogroups_2024-Update
Solyc01g086820 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc02g077480 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Solyc04g074580 No alias Histone H3 (AHRD V3.3 *** K7VSQ3_MAIZE) 0.05 Orthogroups_2024-Update
Solyc10g008910 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.04 Orthogroups_2024-Update
Solyc12g056540 No alias Histone H3 (AHRD V3.3 *** K4DFY5_SOLLC) 0.04 Orthogroups_2024-Update
Sopen01g030620 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g030790 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
evm.model.contig_2255.2 No alias (at5g10980 : 218.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 24 155
No external refs found!