At3g23270

Description : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP1]

Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g23270
Cluster	HCCA clusters: Cluster_232

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp1s126_162V6	No alias	T2L20.24; expressed protein [Arabidopsis thaliana]	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0005543	phospholipid binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000408	Reg_chr_condens	544	588
IPR000408	Reg_chr_condens	270	318
IPR000408	Reg_chr_condens	490	539
IPR000408	Reg_chr_condens	321	372
IPR000408	Reg_chr_condens	376	425
IPR000408	Reg_chr_condens	441	487
IPR027988	BRX_N	846	880
IPR013591	Brevis_radix_dom	948	1002
IPR001849	PH_domain	17	120
IPR000306	Znf_FYVE	595	661

External Links

No external refs found!

At3g23270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation