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  5. Solyc03g083840

Solyc03g083840


Description : Pectinesterase (AHRD V3.3 *** K4BIF9_SOLLC)


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g083840
Cluster HCCA clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.04 Orthogroups_2024-Update
At4g33220 No alias Probable pectinesterase/pectinesterase inhibitor 44... 0.03 Orthogroups_2024-Update
Brara.A00470.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.02G008400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.07G024200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.07G024300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Orthogroups_2024-Update
Glyma.15G184400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
HORVU5Hr1G010860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os06g09340 No alias pectinesterase, putative, expressed 0.04 Orthogroups_2024-Update
MA_10434002g0010 No alias (at3g49220 : 399.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_130858g0010 No alias (at5g53370 : 416.0) pectin methylesterase PCR fragment F... 0.03 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.003G072800 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Seita.5G344400.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sopen02g024920 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 220 518
IPR006501 Pectinesterase_inhib_dom 37 177
No external refs found!