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  5. HORVU7Hr1G029150.2

HORVU7Hr1G029150.2


Description : RUB ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G029150.2
Cluster HCAA Clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
163447 No alias ubiquitin 4 0.02 Orthogroups_2024-Update
At1g55060 No alias Polyubiquitin 12 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7K8] 0.02 Orthogroups_2024-Update
Bradi1g32700 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Glyma.13G138600 No alias ubiquitin 4 0.02 Orthogroups_2024-Update
HORVU5Hr1G065170.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
LOC_Os10g34960 No alias ubiquitin family protein, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.002G204200.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 31 102
IPR000626 Ubiquitin_dom 107 178
No external refs found!