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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Hordeum vulgare: HORVU7Hr1G036380.2 | |
| Cluster | HCAA Clusters: Cluster_272 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_10724 | No alias | ring-h2 finger protein atl33 | 0.03 | Orthogroups_2024-Update | |
| A4A49_18667 | No alias | ring-h2 finger protein atl18 | 0.03 | Orthogroups_2024-Update | |
| A4A49_36505 | No alias | e3 ubiquitin-protein ligase atl6 | 0.02 | Orthogroups_2024-Update | |
| At1g72200 | No alias | RING-H2 finger protein ATL11... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g32080 | No alias | RING-H2 finger A3A | 0.03 | Orthogroups_2024-Update | |
| Bradi2g49152 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g60770 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi5g18837 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Brara.A02911.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.I03307.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G041549 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G177000 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G242800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.14G177900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Kfl00495_0060 | kfl00495_0060_v1.1 | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g44636 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g57410 | No alias | RING-H2 finger protein ATL5D, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os07g42610 | No alias | RING finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_2679g0010 | No alias | (at3g16720 : 111.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| MA_94359g0010 | No alias | (at4g35480 : 121.0) Encodes a putative RING-H2 finger... | 0.02 | Orthogroups_2024-Update | |
| MA_9591879g0010 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
| PSME_00003016-RA | No alias | (at1g72200 : 114.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| Potri.013G073500 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Seita.4G173000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Seita.9G336200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G109600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G181200.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G157300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Solyc05g055140 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) | 0.03 | Orthogroups_2024-Update | |
| Solyc06g064440 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 *-*... | 0.02 | Orthogroups_2024-Update | |
| Sopen01g037550 | No alias | Ring finger domain | 0.02 | Orthogroups_2024-Update | |
| Sopen09g030100 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
| BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
| BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 148 | 191 |
| No external refs found! |