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  5. At3g24620

At3g24620


Description : Rho guanine nucleotide exchange factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LV40]


Gene families : OG_42_0000202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g24620
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
At1g79860 No alias Rop guanine nucleotide exchange factor 12... 0.03 Orthogroups_2024-Update
Bradi3g10080 No alias RHO guanyl-nucleotide exchange factor 8 0.02 Orthogroups_2024-Update
Bradi5g18137 No alias RHO guanyl-nucleotide exchange factor 3 0.03 Orthogroups_2024-Update
LOC_Os02g17240 No alias ATROPGEF7/ROPGEF7, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00019480-RA No alias (at5g02010 : 310.0) Encodes a member of KPP-like gene... 0.04 Orthogroups_2024-Update
Pp1s58_274V6 No alias hypothetical protein similar to Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.3G221100.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Sobic.003G254200.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.03 Orthogroups_2024-Update
Sobic.004G123100.2 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.02 Orthogroups_2024-Update
Sobic.006G176400.1 No alias RopGEF guanine nucleotide exchange factor *(PRONE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR005512 PRONE_dom 85 433
No external refs found!