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  5. HORVU7Hr1G054390.1

HORVU7Hr1G054390.1


Description : MADS/AGL-type transcription factor


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G054390.1
Cluster HCAA Clusters: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
A4A49_18078 No alias developmental protein sepallata 1 0.06 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.04 Orthogroups_2024-Update
At3g57230 No alias Agamous-like MADS-box protein AGL16... 0.03 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.06 Orthogroups_2024-Update
Brara.D01347.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03360.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Brara.K00360.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G110153 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G137510 No alias AGAMOUS-like 8 0.02 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.05 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.08G310100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.20G136600 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g06750 No alias OsMADS5 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
MA_17919g0010 No alias (q6eu39|mads6_orysa : 111.0) MADS-box transcription... 0.03 Orthogroups_2024-Update
Potri.T101400 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Seita.1G273400.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.02 Orthogroups_2024-Update
Seita.3G236800.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.06 Orthogroups_2024-Update
Seita.5G404600.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.03 Orthogroups_2024-Update
Sobic.004G281000.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Solyc10g017640 No alias MADS-box transcription factor (AHRD V3.3 *-* G7L1F7_MEDTR) 0.03 Orthogroups_2024-Update
Solyc12g056460 No alias MADS box transcription factor (AHRD V3.3 *** C3PTE7_POPTO) 0.05 Orthogroups_2024-Update
Sopen05g006790 No alias K-box region 0.02 Orthogroups_2024-Update
Sopen07g029280 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 47 94
No external refs found!