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  5. HORVU7Hr1G057310.5

HORVU7Hr1G057310.5


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000917 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G057310.5
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G021498 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G073228 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G152800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G019600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Sopen01g034140 No alias Ring finger domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 246 281
No external refs found!