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  5. HORVU7Hr1G063020.3

HORVU7Hr1G063020.3


Description : subfamily ABCB transporter


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G063020.3
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
A4A49_07249 No alias abc transporter b family member 19 0.03 Orthogroups_2024-Update
A4A49_25017 No alias abc transporter b family member 9 0.03 Orthogroups_2024-Update
At1g10680 No alias ABC transporter B family member 10... 0.02 Orthogroups_2024-Update
At2g47000 No alias ABC transporter B family member 4... 0.03 Orthogroups_2024-Update
Bradi2g17710 No alias P-glycoprotein 11 0.03 Orthogroups_2024-Update
Bradi2g47400 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Brara.C01848.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.D02299.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Brara.F03156.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Brara.I00328.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
GRMZM2G004748 No alias P-glycoprotein 2 0.03 Orthogroups_2024-Update
GRMZM2G333183 No alias ATP binding cassette subfamily B1 0.03 Orthogroups_2024-Update
Glyma.02G008000 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Glyma.19G184300 No alias ATP binding cassette subfamily B1 0.02 Orthogroups_2024-Update
MA_10436810g0020 No alias (at3g28345 : 992.0) ABC transporter family protein;... 0.02 Orthogroups_2024-Update
MA_107576g0010 No alias (q6yuu5|mdr_orysa : 852.0) Putative multidrug resistance... 0.02 Orthogroups_2024-Update
MA_62683g0010 No alias (at2g36910 : 1072.0) Belongs to the family of... 0.03 Orthogroups_2024-Update
MA_83806g0010 No alias (q6yuu5|mdr_orysa : 1360.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00023484-RA No alias (at2g36910 : 1766.0) Belongs to the family of... 0.03 Orthogroups_2024-Update
PSME_00024064-RA No alias (at3g28345 : 1431.0) ABC transporter family protein;... 0.03 Orthogroups_2024-Update
PSME_00031965-RA No alias (q6yuu5|mdr_orysa : 1268.0) Putative multidrug... 0.02 Orthogroups_2024-Update
Potri.001G165000 No alias ATP binding cassette subfamily B19 0.02 Orthogroups_2024-Update
Potri.008G050400 No alias P-glycoprotein 20 0.02 Orthogroups_2024-Update
Potri.010G003000 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Pp1s29_108V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Seita.5G302200.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Seita.6G060300.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sopen12g023550 No alias ABC transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 511 660
IPR011527 ABC1_TM_dom 833 1099
IPR011527 ABC1_TM_dom 170 442
IPR003439 ABC_transporter-like 1171 1319
No external refs found!