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  5. HORVU7Hr1G066300.15

HORVU7Hr1G066300.15


Description : component *(SMC1/TTN8) of cohesin regulator complex


Gene families : OG_42_0004165 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004165_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G066300.15
Cluster HCAA Clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
At3g54670 No alias Structural maintenance of chromosomes protein 1... 0.05 Orthogroups_2024-Update
Bradi3g12830 No alias Structural maintenance of chromosomes (SMC) family protein 0.03 Orthogroups_2024-Update
Glyma.10G037300 No alias Structural maintenance of chromosomes (SMC) family protein 0.06 Orthogroups_2024-Update
Glyma.13G123700 No alias Structural maintenance of chromosomes (SMC) family protein 0.06 Orthogroups_2024-Update
Seita.6G255600.1 No alias component *(SMC1/TTN8) of cohesin regulator complex 0.05 Orthogroups_2024-Update
Solyc06g083870 No alias structural maintenance of chromosomes 1 0.02 Orthogroups_2024-Update
evm.model.contig_4496.2 No alias (at3g54670 : 560.0) Encodes a member of the Arabidopsis... 0.02 Orthogroups_2024-Update
evm.model.tig00020553.145 No alias (at3g54670 : 678.0) Encodes a member of the Arabidopsis... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0005694 chromosome IEA 16Dec
BP GO:0051276 chromosome organization IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0061666 UFM1 ligase activity IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
MF GO:0071568 UFM1 transferase activity IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR010935 SMC_hinge 526 641
IPR003395 RecF/RecN/SMC_N 18 326
No external refs found!