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  5. HORVU7Hr1G073170.2

HORVU7Hr1G073170.2


Description : RNA editing factor *(MORF)


Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G073170.2
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
At1g11430 No alias Multiple organellar RNA editing factor 9, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi3g14650 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
Bradi4g22160 No alias Function unknown 0.08 Orthogroups_2024-Update
Bradi5g20660 No alias differentiation and greening-like 1 0.05 Orthogroups_2024-Update
Brara.C03552.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
Brara.D02132.1 No alias RNA editing factor *(MORF) 0.06 Orthogroups_2024-Update
Brara.E00914.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Brara.E02636.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.G00411.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
GRMZM2G003765 No alias plastid developmental protein DAG, putative 0.05 Orthogroups_2024-Update
GRMZM2G383540 No alias plastid developmental protein DAG, putative 0.03 Orthogroups_2024-Update
GRMZM5G808811 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Glyma.12G169200 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.12G228400 No alias cobalt ion binding 0.03 Orthogroups_2024-Update
Glyma.13G271400 No alias cobalt ion binding 0.04 Orthogroups_2024-Update
Glyma.15G064300 No alias plastid developmental protein DAG, putative 0.03 Orthogroups_2024-Update
LOC_Os09g04670 No alias DAG protein, chloroplast precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_8126g0010 No alias (at3g15000 : 162.0) cobalt ion binding; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.003G015100 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.011G112200 No alias cobalt ion binding 0.04 Orthogroups_2024-Update
Seita.4G012800.1 No alias RNA editing factor *(MORF) 0.06 Orthogroups_2024-Update
Seita.4G211100.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Seita.8G095000.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Sobic.001G485600.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Sobic.006G204100.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.010G013900.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Solyc02g079210 No alias DAG protein (AHRD V3.3 *** B6SJX7_MAIZE) 0.04 Orthogroups_2024-Update
Solyc05g054960 No alias Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) 0.04 Orthogroups_2024-Update
Solyc06g008220 No alias DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) 0.02 Orthogroups_2024-Update
Solyc10g007180 No alias DAG protein (AHRD V3.3 *** A0A0K9PW98_ZOSMR) 0.02 Orthogroups_2024-Update
Sopen02g024540 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen05g033420 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen06g003080 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Sopen10g003300 No alias hypothetical protein 0.05 Orthogroups_2024-Update
Sopen12g006020 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0071586 CAAX-box protein processing IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!