At3g25650


Description : SKP1-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEL7]


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g25650
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
At3g60020 No alias SK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPE2] 0.06 Orthogroups_2024-Update
Bradi3g43760 No alias SKP1-like 4 0.06 Orthogroups_2024-Update
Brara.F00402.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
Cre12.g501200 No alias E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.01 Orthogroups_2024-Update
GRMZM2G060394 No alias SKP1-like 4 0.04 Orthogroups_2024-Update
Glyma.16G123700 No alias S phase kinase-associated protein 1 0.04 Orthogroups_2024-Update
HORVU5Hr1G084140.4 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 118 165
IPR016073 Skp1_comp_POZ 4 63
No external refs found!