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  5. HORVU7Hr1G079190.2

HORVU7Hr1G079190.2


Description : component *(bTHXc) of small plastid ribosomal-subunit proteome


Gene families : OG_42_0003423 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G079190.2
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Bradi1g38630 No alias plastid-specific ribosomal protein 4 0.06 Orthogroups_2024-Update
Brara.E00706.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
GRMZM2G058250 No alias plastid-specific ribosomal protein 4 0.03 Orthogroups_2024-Update
Kfl00060_0270 kfl00060_0270_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_202598g0010 No alias (at2g38140 : 82.0) plastid-specific ribosomal protein 4... 0.08 Orthogroups_2024-Update
Mp1g04130.1 No alias component psPSRP4 of small ribosomal subunit proteome 0.04 Orthogroups_2024-Update
Potri.016G113700 No alias plastid-specific ribosomal protein 4 0.03 Orthogroups_2024-Update
Pp1s29_213V6 No alias F16M14.7; chloroplast 30S ribosomal protein S31 (PSRP4)... 0.02 Orthogroups_2024-Update
Seita.4G218100.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
Sobic.003G393800.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
Solyc05g052710 No alias 30S ribosomal protein S31 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen05g031230 No alias hypothetical protein 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR030826 Ribo_THX 43 144
No external refs found!