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  5. HORVU7Hr1G079400.3

HORVU7Hr1G079400.3


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G079400.3
Cluster HCAA Clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Brara.K00815.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
GRMZM2G135651 No alias cyclic nucleotide-gated channel 17 0.03 Orthogroups_2024-Update
Glyma.06G077600 No alias cyclic nucleotide-gated channel 14 0.04 Orthogroups_2024-Update
Potri.001G407800 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
Potri.004G212300 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
Potri.012G002200 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
Seita.3G390700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.004G325400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc03g098210 No alias Cyclic nucleotide gated channel CNGC15 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g051920 No alias Cyclic nucleotide gated channel CNGC5 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g003230 No alias Ion transport protein 0.04 Orthogroups_2024-Update
evm.model.tig00021348.58 No alias (at1g19780 : 96.3) member of Cyclic nucleotide gated... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 494 586
IPR005821 Ion_trans_dom 81 399
No external refs found!