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  5. HORVU7Hr1G081400.3

HORVU7Hr1G081400.3


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G081400.3
Cluster HCAA Clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
444400 No alias plastid transcriptionally active 15 0.03 Orthogroups_2024-Update
A4A49_33929 No alias transcription termination factor mterf8, chloroplastic 0.02 Orthogroups_2024-Update
At5g64950 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83] 0.03 Orthogroups_2024-Update
Bradi1g16160 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
Brara.A02580.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G005510.2 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
LOC_Os05g34160 No alias mTERF domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g24090 No alias mTERF domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_26585g0010 No alias (at5g64950 : 83.2) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00030142-RA No alias (at5g64950 : 89.4) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00049593-RA No alias (at5g64950 : 87.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.05 Orthogroups_2024-Update
Pp1s219_66V6 No alias No description available 0.03 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
Seita.4G095000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
Solyc11g022600 No alias Mitochondrial transcription termination factor-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 105 378
No external refs found!