HORVU7Hr1G081910.1

Description : component *(eL43) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU7Hr1G081910.1
Cluster	HCAA Clusters: Cluster_246

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g17040	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Bradi2g46580	No alias	Zinc-binding ribosomal protein family protein	0.09	Orthogroups_2024-Update
Brara.D00174.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Brara.G01877.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.I04155.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Cre06.g257150	No alias	Zinc-binding ribosomal protein family protein	0.07	Orthogroups_2024-Update
GRMZM2G088880	No alias	Zinc-binding ribosomal protein family protein	0.02	Orthogroups_2024-Update
Glyma.05G067400	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Glyma.07G118600	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Glyma.11G039200	No alias	Zinc-binding ribosomal protein family protein	0.03	Orthogroups_2024-Update
Glyma.17G149600	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
HORVU3Hr1G062590.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Mp5g09590.1	No alias	component RPL37a of LSU proteome component	0.06	Orthogroups_2024-Update
PSME_00003753-RA	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.03	Orthogroups_2024-Update
PSME_00039252-RA	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.03	Orthogroups_2024-Update
PSME_00044091-RA	No alias	(q5qm99\|rl37a_orysa : 183.0) 60S ribosomal protein L37a...	0.03	Orthogroups_2024-Update
Potri.001G149300	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
Pp1s200_49V6	No alias	60s ribosomal protein l37a	0.09	Orthogroups_2024-Update
Pp1s2_289V6	No alias	60s ribosomal protein l37a	0.08	Orthogroups_2024-Update
Pp1s39_288V6	No alias	60s ribosomal protein l37a	0.09	Orthogroups_2024-Update
Pp1s76_74V6	No alias	60s ribosomal protein l37a	0.07	Orthogroups_2024-Update
Seita.5G271000.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Seita.7G069200.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.004G045400.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Sobic.006G047400.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Sobic.009G227400.1	No alias	component *(eL43) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Solyc08g007140	No alias	60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI)	0.06	Orthogroups_2024-Update
Solyc08g077720	No alias	60S ribosomal protein L37a (AHRD V3.3 *** RL37A_GOSHI)	0.09	Orthogroups_2024-Update
Sopen08g003090	No alias	Ribosomal L37ae protein family	0.07	Orthogroups_2024-Update
Sopen08g026220	No alias	Ribosomal L37ae protein family	0.11	Orthogroups_2024-Update
evm.model.tig00000718.64	No alias	(q9xhe4\|rl37a_goshi : 145.0) 60S ribosomal protein L37a...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Predicted GO
MF	GO:0004055	argininosuccinate synthase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0005048	signal sequence binding	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
BP	GO:0006275	regulation of DNA replication	IEP	Predicted GO
BP	GO:0006353	DNA-templated transcription, termination	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006525	arginine metabolic process	IEP	Predicted GO
BP	GO:0006526	arginine biosynthetic process	IEP	Predicted GO
BP	GO:0006621	protein retention in ER lumen	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
MF	GO:0010011	auxin binding	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
BP	GO:0032507	maintenance of protein location in cell	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0042277	peptide binding	IEP	Predicted GO
MF	GO:0042562	hormone binding	IEP	Predicted GO
BP	GO:0045185	maintenance of protein location	IEP	Predicted GO
MF	GO:0046923	ER retention sequence binding	IEP	Predicted GO
BP	GO:0051235	maintenance of location	IEP	Predicted GO
BP	GO:0051651	maintenance of location in cell	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002674	Ribosomal_L37ae	39	123

External Links

No external refs found!

HORVU7Hr1G081910.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation