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  5. HORVU7Hr1G084980.2

HORVU7Hr1G084980.2


Description : Unknown function


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G084980.2
Cluster HCAA Clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At1g03540 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.05 Orthogroups_2024-Update
At3g16610 No alias Pentatricopeptide repeat-containing protein At3g16610... 0.03 Orthogroups_2024-Update
Glyma.13G001700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G038460.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os07g20420 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g28830 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432670g0020 No alias (at3g02010 : 676.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
MA_385322g0010 No alias (at1g08070 : 385.0) Encodes a chloroplast RNA editing... 0.02 Orthogroups_2024-Update
MA_5481g0010 No alias (at4g18750 : 690.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
MA_59599g0010 No alias (at3g49170 : 646.0) embryo defective 2261 (EMB2261);... 0.02 Orthogroups_2024-Update
MA_9384g0020 No alias (at3g49170 : 527.0) embryo defective 2261 (EMB2261);... 0.02 Orthogroups_2024-Update
MA_99849g0010 No alias (at4g02750 : 581.0) Tetratricopeptide repeat (TPR)-like... 0.06 Orthogroups_2024-Update
PSME_00026226-RA No alias (at3g46790 : 588.0) Encodes a member of a PCMP (plant... 0.02 Orthogroups_2024-Update
Potri.014G097000 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
Solyc02g081900 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009890 negative regulation of biosynthetic process IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 212
IPR002885 Pentatricopeptide_repeat 417 440
IPR002885 Pentatricopeptide_repeat 317 342
IPR002885 Pentatricopeptide_repeat 213 241
IPR002885 Pentatricopeptide_repeat 83 110
IPR002885 Pentatricopeptide_repeat 112 158
IPR002885 Pentatricopeptide_repeat 242 289
IPR002885 Pentatricopeptide_repeat 343 391
No external refs found!