HORVU7Hr1G088600.8

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Hordeum vulgare: HORVU7Hr1G088600.8
Cluster	HCAA Clusters: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
At2g37280	No alias	pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280]	0.03	Orthogroups_2024-Update
At3g53480	No alias	ABC transporter G family member 37...	0.04	Orthogroups_2024-Update
Bradi3g41987	No alias	pleiotropic drug resistance 11	0.05	Orthogroups_2024-Update
Brara.E01435.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Glyma.15G011800	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
LOC_Os09g16290	No alias	ABC-2 type transporter, putative, expressed	0.04	Orthogroups_2024-Update
Sobic.004G254100.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sopen01g044530	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	918	1131
IPR013525	ABC_2_trans	220	432
IPR003439	ABC_transporter-like	615	772
IPR013581	PDR_assoc	446	504

External Links

No external refs found!