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  5. HORVU7Hr1G091250.3

HORVU7Hr1G091250.3


Description : alpha amylase


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G091250.3
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Bradi1g35050 No alias alpha-amylase-like 0.02 Orthogroups_2024-Update
GRMZM2G103055 No alias alpha-amylase-like 0.02 Orthogroups_2024-Update
GRMZM5G863596 No alias alpha-amylase-like 3 0.05 Orthogroups_2024-Update
Glyma.18G125300 No alias alpha-amylase-like 3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA 16Dec
MF GO:0005509 calcium ion binding IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 369 427
IPR006047 Glyco_hydro_13_cat_dom 50 211
No external refs found!