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  5. HORVU7Hr1G100380.1

HORVU7Hr1G100380.1


Description : histone *(H3)


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Hordeum vulgare: HORVU7Hr1G100380.1
Cluster HCAA Clusters: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Bradi3g45290 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.D00649.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G171387 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G179005 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G241800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G217100 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G222200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G074240.4 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G024990.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
MA_113838g0010 No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Mp3g07730.1 No alias histone (H3) 0.02 Orthogroups_2024-Update
Mp7g16200.1 No alias histone (H3) 0.03 Orthogroups_2024-Update
Seita.3G198000.1 No alias histone H3 variant *(CENH3) 0.02 Orthogroups_2024-Update
Sobic.001G284800.1 No alias histone *(H3) 0.01 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.03 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
CC GO:0009539 photosystem II reaction center IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 2 113
No external refs found!